Projects

Some Projects that Use ELK

This page lists some projects that use ELK for classification of OWL EL ontologies. Let us know if you use ELK in your project, we would be happy to mention it here.

• Aber-OWL is a framework for ontology-based access to biological data.
• Brain a Java library to easily build and query OWL ontologies and knowledge bases.
• The Galaxy Project is an open, web-based platform for data intensive biomedical research.
• Gene Ontology is formal ontology that represents over 40,000 biological concepts describing how genes encode biological functions at the molecular, cellular and tissue system levels.
• The GOAL Browser exploits OWL semantics to query over a combination of Gene Ontology, Mouse Phenotype and Human Disease Ontology annotations.
• Nova Hybrid Reasoner (NoHR) is a plug-in for Protégé that allows its users to query knowledge bases composed of an ontology in OWL 2 EL and a set of reasoning rules.
• Phenoscape is an ontology-based infrastructure that enables linking phenotypes across different fields of biology by the semantic similarity of their descriptions.
• Snow Owl is a collaborative authoring tool for developing of ontologies based on SNOMED CT.
• Uberon is an integrated cross-species ontology covering anatomical structures in animals.
• Virtual Fly Brain (VFB) - an interactive tool for neurobiologists to explore the detailed neuroanatomy, gene expression, and associated phenotypes of the adult Drosophila melanogaster brain.