Course information for the lecture "Applications of Transformer Networks in Bio- and Cheminformatics"
- Every Tuesday 12:30 - 14:00 in seminar room 25.02.02.21
- First lecture 09.04.2024 & last lecture 16.07.2024
- Slides are available as PDF in the folder "Lecture slides".
- Lecture videos are available at: https://www.youtube.com/@DL4Molecules/playlists
- Training of protein language models (self-supervised and supervised)
- The ESM-1b protein transformer network
- Gradient Boosting Decision Trees
- What are small molecules?
- Transformer networks for small molecules
- Best practices for optimizing/training Transformer Networks
- Multimodal transformer networks (proteins and small molecules in the same input sequence)
- Every Tuesday 16:30 - 18:00 in seminar room 25.02.02.21
- First exercise group: 30.04.2024 (discussion of worksheets 1 & 2) & Last exercise group: 16.07.2024
- Published weekly on Tuesdays in the Worksheets folder. First worksheet will be published on 16.04.2024
- Submission Deadline: The following Monday at 23:59
- Submit online via https://uni-duesseldorf.sciebo.de/s/hCt1rTP23EeWmUC (if you have multiple files, zip them)
- Admission to exams requires 50% of points on worksheets
TBD